Byung-Jun Yoon
California Institue of Technology
Department of Electrical Engineering
Digital Signal Processing Group
[NEW!!] Please visit my new homepage at http://www.ece.tamu.edu/~bjyoon
BIOGRAPHY
- Current Position : Assistant Professor, Texas A&M University, Electrical&Computer Engineering
- 2006.12~ 2007.11 : Post Doctoral Researcher, Caltech, Electrical Engineering
- 2002.6 ~ 2006.11 : Ph.D., Caltech, Electrical Engineering (Thesis Advisor: Prof. P. P. Vaidyanathan)
- 2006.6 ~ 2006.9 : Intern, Microsoft Research (Mentor: Dr. Ivan Tashev)
- 2005.6 ~ 2005.9 : Intern, Microsoft Research (Mentor: Dr. Henrique S. Malvar)
- 2004.6 ~ 2004.9 : Intern, Microsoft Research (Mentor: Dr. Henrique S. Malvar)
- 2001.9 ~ 2002.6 : M.S., Caltech, Electrical Engineering
- 1998.3 ~ 2001.6 : Software Developer, SecureSoft Inc. / Junghwa Systems Inc.
- 1994.3 ~ 1998.2 : B.S.E., Seoul National University, School of Electrical Engineering
RESEARCH INTERESTS
- Genomic Signal Processing
- Bioinformatics and Systems Biology
- Multirate Signal Processing and Filter Bank Theory
SELECTED PUBLICATIONS | PHD THESIS
-
Signal Processing Methods for Genomic Sequence Analysis
Byung-Jun Yoon, Ph.D. Thesis, California Institute of Technology, Electrical Engineering, 2007. (Defended Nov. 2006)
SELECTED PUBLICATIONS | JOURNAL
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Structural alignment of RNAs using profile-csHMMs and its application to RNA homology search: Overview and new results
[Paper]
Byung-Jun Yoon and P. P. Vaidyanathan,
IEEE Transactions on Circuits and Systems: Part-I, IEEE Transactions on Automatic Control, Joint Special Issue on Systems Biology, to appear in Jan. 2008.
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Computational identification and analysis of noncoding RNAs - Unearthing the buried treasures in the genome
[Paper]
[IEEExplore]
Byung-Jun Yoon and P. P. Vaidyanathan,
IEEE Signal Processing Magazine, Special Issue on Signal Processing Methods in Genomics and Proteomics, vol. 24, no. 1, pp. 64-74, Jan. 2007.
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Context-sensitive hidden Markov models for modeling long-range dependencies in symbol sequences
[Paper]
[IEEE Xplore]
Byung-Jun Yoon and P. P. Vaidyanathan,
IEEE Transactions on Signal Processing, vol. 54, pp. 4169-4184, Nov. 2006.
- The role of signal-processing concepts in genomics and proteomics
[Paper]
P. P. Vaidyanathan and Byung-Jun Yoon,
Journal of the Franklin Institute (invited paper), Special Issue on Genomics, vol. 341, pp. 111-135, 2004.
- Complete list of publications
[See List]
SELECTED PUBLICATIONS | CONFERENCE
- Fast Structural Similarity Search of Noncoding RNAs Based on Matched Filtering of Stem Patterns
[Paper]
Byung-Jun Yoon and P. P. Vaidyanathan,
Proc. 41st Asilomar Conference on Signals, Systems, and Computers, Monterey, CA, Nov. 2007.
- Fast search of sequences with complex symbol correlations using profile context-sensitive HMMs and pre-screening filters
[Paper]
Byung-Jun Yoon and P. P. Vaidyanathan,
Proc. 32nd IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), Honolulu, Hawaii, April 2007.
- Robust adaptive beamforming algorithm using instantaneous direction of arrival with enhanced noise suppression capability
[Paper]
Byung-Jun Yoon, Ivan Tashev, and Alex Acero,
Proc. 32nd IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), Honolulu, Hawaii, April 2007.
- Profile context-sensitive HMMs for probabilistic modeling of sequences with complex correlations
[Paper]
Byung-Jun Yoon and P. P. Vaidyanathan,
Proc. 31st IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP), Toulouse, May 2006.
- Digital filters for gene prediction applications
[Paper]
P. P. Vaidyanathan and Byung-Jun Yoon,
Proc. 36th Asilomar Conference on Signals, Systems, and Computers, Monterey, CA, Nov. 2002.
- Gene and exon prediction using allpass-based filters
[Paper]
P. P. Vaidyanathan and Byung-Jun Yoon,
IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS), Raleigh, NC, Oct. 2002.
- Complete list of publications
[See List]
CONTACT
- Mailing Address :
Dept. of Elec&Comp Eng, ZEC 216G
Texas A&M University
College Station, TX 77843-3128
- E-mail :
byung-jun yoon@caltech.edu (only bold characters)
LINKS
MISCELLANEOUS
since Oct.09.2002 - by Byung-Jun Yoon
- last update: Jan.16.2008 -